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Undergraduate research training opportunities
We welcome experienced and inexperienced undergraduate students to
join our lab to receive training in computer modeling of
biomolecules. More advanced trainee will direclty participate in real
research projects. Financial support during learning/training (!) is
possible through multiple mechanisms.
Lecture notes on biomolecular modeling
- CHARMM Analysis Tools
(PDF, 3.7 MB,
MMTSB/CTBP Workshop 2009)
- Implicit Solvent: Principles and Challenges
(PDF, 8.5 MB,
MMTSB/CTBP Workshop 2009)
- Replica Exchange Sampling
(PDF, 12.2
MB, MMTSB/CTBP Workshop 2009)
- How to fold a protein?
(PDF, 10.1 MB,
KSU GROW Summer Workshop 2010)
Courses taught at K-State
BIOCH 265: Introduction to Organic & Biochemistry
BIOCH 590: Physical Studies of Biomacromolecules
- Course Information and Syllabus
- Topics and Lecture Notes
- Introduction to biological macromolecules
(PDF, 4.6 MB)
- Classical and statistical thermodynamics; Thermochemistry
(PDF, 2.3 MB)
- Molecualr interactions and biomolecular structures; Computer modeling
(PDF, 6.9 MB)
- Size and shape of macromolecules: Diffusion and light scattering
(PDF, 2.8 MB)
- Quantum mechanics and Optical spectroscopy
(PDF, 17.3 MB)
- NMR: basic principles and applicaitons to biomolecules
(PDF, 21.6 MB)
- Protein X-ray crystallography
(PDF, 5.4 MB)
BIOCH 915: Biomolecular Modeling
- This course introduces the basic principles of computer modeling
and simulation of biomolecules, with a focus on practical skills of
utilizing publically available computer tools to address research
questions in biochemical and biophysical research. The students are
required to propose and complete independent course projects.
Courses are managed by K-State Online:
an Internet based learning management system.
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